#include <iso.h>
Public Member Functions | |
| TransitionProxy | trans (const long ipHi, const long ipLo) |
| void | Reset () |
Detailed Description
Member Function Documentation
◆ Reset()
|
inline |
Definition at line 568 of file iso.h.
References CaseBCheck, chTypeAtomUsed, fb, lgErrGenDone, lgLevelsEverLowered, lgLevelsLowered, lgMustReeval, lgPopsRescaled, RadRec_caseB, and TwoNu.
Referenced by InitSimPostparse(), and IterRestart().
◆ trans()
|
inline |
Definition at line 444 of file iso.h.
Referenced by atom_oi_calc(), cdTemp(), ContCreatePointers(), ConvIterCheck(), CoolCalc(), CS_l_mixing_S62(), dBase_solve(), DoFSMixing(), eden_sum(), Fe2_cooling(), FeIILevelPops(), ForbiddenAuls(), GetStandardHeLines(), GrainTemperature(), helike_transprob(), IonHydro(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), iso_collide(), iso_continuum_lower(), iso_cool(), iso_create(), iso_level(), iso_renorm(), iso_solve(), iso_suprathermal(), IterStart(), lines_general(), lines_helium(), lines_hydro(), lines_lv1_k_zn(), PresTotCurrent(), PrtAllTau(), PrtComment(), PrtHydroTrace1(), PrtLinePres(), RT_diffuse(), RT_line_all(), RT_line_driving(), RT_OTS(), RT_stark(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), Save_Line_RT(), SaveDo(), and SaveSpecial().
Field Documentation
◆ bnl_effective
| multi_arr<double,3> t_iso_sp::bnl_effective |
Definition at line 566 of file iso.h.
Referenced by iso_allocate(), and iso_collapsed_bnl_set().
◆ BranchRatio
| multi_arr<double,2> t_iso_sp::BranchRatio |
Definition at line 451 of file iso.h.
Referenced by iso_allocate(), iso_cascade(), iso_radiative_recomb_effective(), and SanityCheckBegin().
◆ CachedAs
Definition at line 567 of file iso.h.
Referenced by helike_transprob(), hydro_transprob(), iso_allocate(), and iso_collapsed_Aul_update().
◆ CascadeProb
| multi_arr<double,2> t_iso_sp::CascadeProb |
Definition at line 450 of file iso.h.
Referenced by iso_allocate(), iso_cascade(), and iso_radiative_recomb_effective().
◆ CaseBCheck
| realnum t_iso_sp::CaseBCheck |
difference between actual case b photons in rtdiffuse, and correct case b
Definition at line 510 of file iso.h.
Referenced by Reset(), and RT_iso_integrate_RRC().
◆ cBal_cool
| double t_iso_sp::cBal_cool |
net cooling due to collisional excit of balmer lines
Definition at line 544 of file iso.h.
Referenced by iso_cool().
◆ chTypeAtomUsed
| char t_iso_sp::chTypeAtomUsed[10] |
flag to set which type of solution was used for level pops, "zero" or "popul"
Definition at line 556 of file iso.h.
Referenced by iso_level(), and Reset().
◆ cLya_cool
| double t_iso_sp::cLya_cool |
net cooling due to collisional excit of Lya
Definition at line 550 of file iso.h.
Referenced by iso_cool().
◆ cLyrest_cool
| double t_iso_sp::cLyrest_cool |
net cooling due to collisional excit of higher lyman lines
Definition at line 547 of file iso.h.
Referenced by iso_cool().
◆ coll_ion
| double t_iso_sp::coll_ion |
net cooling due to collisional ionization
Definition at line 529 of file iso.h.
Referenced by iso_cool().
◆ cRest_cool
| double t_iso_sp::cRest_cool |
net cooling due to collisional excit of higher lines
Definition at line 532 of file iso.h.
Referenced by iso_cool().
◆ dLTot
| double t_iso_sp::dLTot |
deriv of net cooling due to total collisional excit of lines
Definition at line 538 of file iso.h.
Referenced by HeatSum(), and iso_cool().
◆ ex
Definition at line 449 of file iso.h.
Referenced by iso_allocate(), iso_cascade(), iso_create(), iso_error_generation(), iso_ionize_recombine(), iso_level(), iso_put_error(), lines_helium(), and RT_stark().
◆ fb
| vector<freeBound> t_iso_sp::fb |
Definition at line 452 of file iso.h.
Referenced by Badnell_rec_init(), ContCreatePointers(), ContRate(), ContSetIntensity(), cross_section(), CS_l_mixing_S62(), DoSatelliteLines(), FillExtraLymanLine(), GrainRateDr(), hydro_vs_coll_str(), hydro_vs_deexcit(), HydroRecCool(), ion_photo(), IonHydro(), iso_allocate(), iso_cascade(), iso_collide(), iso_collisional_ionization(), iso_cool(), iso_create(), iso_departure_coefficients(), iso_dielec_recomb_rate(), iso_ionize_recombine(), iso_level(), iso_photo(), iso_rad_rec_cooling_approx(), iso_rad_rec_cooling_extra(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_radrecomb_from_cross_section(), iso_satellite_update(), iso_set_ion_rates(), iso_zero(), IterRestart(), IterStart(), lgCheckMonitors(), lines_continuum(), mole_h_rate_diagnostics(), mole_h_reactions(), OpacityAdd1Element(), OpacityAddTotal(), OpacityCreateAll(), PrintRates(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHeader(), PrtHydroTrace1a(), PrtZone(), radius_increment(), Reset(), RT_continuum(), RT_iso_integrate_RRC(), RT_OTS(), RT_tau_init(), SanityCheckBegin(), save_opacity(), SaveDo(), and tfidle().
◆ FreeBnd_net_Cool_Rate
| double t_iso_sp::FreeBnd_net_Cool_Rate |
net free bound cooling for this element
Definition at line 526 of file iso.h.
Referenced by iso_cool().
◆ HighestLevelOpacStack
| vector<double> t_iso_sp::HighestLevelOpacStack |
Definition at line 588 of file iso.h.
Referenced by iso_radiative_recomb(), and OpacityCreateAll().
◆ ipTrans
| multi_arr<long,2> t_iso_sp::ipTrans |
Definition at line 448 of file iso.h.
Referenced by iso_allocate(), and trans().
◆ lgErrGenDone
| bool t_iso_sp::lgErrGenDone |
this is flag saying that random gaussians have already been set...they should only be done once per model, and this must be reset to false at the beginning of each model.
Definition at line 560 of file iso.h.
Referenced by iso_error_generation(), iso_update_rates(), and Reset().
◆ lgLevelsEverLowered
| bool t_iso_sp::lgLevelsEverLowered |
This variable is set to true if the continuum was lowered at any point in the calculation. Necessary because some models will lowered continuum at intermediate points but not last zone.
Definition at line 478 of file iso.h.
Referenced by iso_continuum_lower(), and Reset().
◆ lgLevelsLowered
| bool t_iso_sp::lgLevelsLowered |
true if the number of levels is currently lowered
Definition at line 474 of file iso.h.
Referenced by iso_collisional_ionization(), iso_continuum_lower(), and Reset().
◆ lgMustReeval
| bool t_iso_sp::lgMustReeval |
Definition at line 481 of file iso.h.
Referenced by iso_continuum_lower(), iso_photo(), iso_radiative_recomb(), and Reset().
◆ lgPopLTE_OK
| bool t_iso_sp::lgPopLTE_OK |
true is all lte populations positive for Hydrogenic atoms
Definition at line 523 of file iso.h.
Referenced by iso_collide().
◆ lgPopsRescaled
| bool t_iso_sp::lgPopsRescaled |
Definition at line 484 of file iso.h.
Referenced by iso_level(), and Reset().
◆ lgPrtDepartCoef
| bool t_iso_sp::lgPrtDepartCoef |
option to print departure coefficients
Definition at line 468 of file iso.h.
Referenced by ParsePrint().
◆ lgPrtLevelPops
| bool t_iso_sp::lgPrtLevelPops |
◆ n_HighestResolved_local
| long int t_iso_sp::n_HighestResolved_local |
the local (pressure lowered) version of the above
Definition at line 507 of file iso.h.
Referenced by InitSimPostparse(), iso_continuum_lower(), iso_level(), iso_radiative_recomb(), iso_update_num_levels(), PrtAllTau(), and PrtComment().
◆ n_HighestResolved_max
| long int t_iso_sp::n_HighestResolved_max |
principal quantum number n of the highest resolved level
Definition at line 505 of file iso.h.
Referenced by Badnell_rec_init(), helike_transprob(), hydro_transprob(), InitCoreload(), InitSimPostparse(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_bnl_print(), iso_collapsed_bnl_set(), iso_collide(), iso_continuum_lower(), iso_update_num_levels(), lgCheckMonitors(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), ParseAtomISO(), ParseCompile(), RT_tau_init(), and SanityCheckBegin().
◆ nCollapsed_local
| long int t_iso_sp::nCollapsed_local |
Definition at line 488 of file iso.h.
Referenced by InitSimPostparse(), iso_continuum_lower(), iso_prt_pops(), iso_radiative_recomb(), iso_update_num_levels(), lgCheckMonitors(), lines(), PresTotCurrent(), PrtComment(), PrtLinePres(), and SaveDo().
◆ nCollapsed_max
| long int t_iso_sp::nCollapsed_max |
the number of collapsed levels, these lie on top of resolved levels
Definition at line 487 of file iso.h.
Referenced by Badnell_rec_init(), GetStandardHeLines(), HeCollidSetup(), InitCoreload(), InitSimPostparse(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_bnl_print(), iso_collapsed_bnl_set(), iso_continuum_lower(), iso_recomb_setup(), iso_update_num_levels(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), ParseAtomISO(), ParseCompile(), PrtAllTau(), and SanityCheckBegin().
◆ numLevels_local
| long int t_iso_sp::numLevels_local |
total number of levels with continuum pressure lowering included this varies from zone to zone, and from model to model, but cannot exceed numLevels_max
Definition at line 498 of file iso.h.
Referenced by DynaIonize(), DynaNewStep(), HydroLevel(), InitSimPostparse(), iso_collide(), iso_continuum_lower(), iso_cool(), iso_departure_coefficients(), iso_ionize_recombine(), iso_level(), iso_photo(), iso_prt_pops(), iso_rad_rec_cooling_approx(), iso_rad_rec_cooling_extra(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_renorm(), iso_set_ion_rates(), iso_update_num_levels(), lgCheckMonitors(), lines(), OpacityAdd1Element(), OpacityAddTotal(), PresTotCurrent(), PrintRates(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHydroTrace1(), PrtLinePres(), prtmet(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_line_driving(), RT_OTS(), RT_stark(), RT_tau_inc(), RT_tau_init(), SaveDo(), SaveLineStuff(), and state_get_put().
◆ numLevels_malloc
| long int t_iso_sp::numLevels_malloc |
number of levels malloc'd in the core load, can't go over that later in later sims can lower number of levels but not raise them
Definition at line 502 of file iso.h.
Referenced by InitCoreload(), and iso_allocate().
◆ numLevels_max
| long int t_iso_sp::numLevels_max |
total number of collapsed and resolve levels, numLevels_max is derived from total resolved and collapsed levels it is the maximum number of levels ever to be used in this core load.
Definition at line 493 of file iso.h.
Referenced by atmdat_readin(), Badnell_rec_init(), ContCreatePointers(), ContSetIntensity(), DoSatelliteLines(), DynaCreateArrays(), DynaSaveLast(), DynaStartZone(), HeCollidSetup(), InitCoreload(), InitCoreloadPostparse(), InitSimPostparse(), ion_trim(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), iso_collide(), iso_collisional_ionization(), iso_continuum_lower(), iso_cool(), iso_create(), iso_departure_coefficients(), iso_error_generation(), iso_ionize_recombine(), iso_level(), iso_photo(), iso_put_recomb_error(), iso_radiative_recomb(), iso_recomb_setup(), iso_satellite(), iso_satellite_update(), iso_solve(), iso_suprathermal(), iso_update_num_levels(), iso_zero(), IterRestart(), IterStart(), lines_continuum(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), OpacityCreateAll(), ParseElement(), PrtAllTau(), radius_increment(), RT_line_all(), RT_stark(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), SaveLineData(), state_get_put(), and store_new_densities().
◆ qTot2S
| double t_iso_sp::qTot2S |
the effective collisional rate from 2S, for h-like and he-like sequences
Definition at line 563 of file iso.h.
Referenced by iso_level().
◆ QuantumNumbers2Index
| multi_arr<long,3> t_iso_sp::QuantumNumbers2Index |
Find index given quantum numbers Since separate j levels within a triplet term are only resolved in the case of 2tripP, allocating memory for a j dimension is unwarranted. Instead iso.QuantumNumbers2Index[ipISO][nelem][2][1][1] will point to 2^3P2, with 2^3P0 and 2^3P1 easily accessed by subtracting 2 and 1 respectively from the returned index.
Definition at line 461 of file iso.h.
Referenced by Badnell_rec_init(), chkCaHeps(), collision_strength_VF01(), cross_section(), DoFSMixing(), he_1trans(), He_cross_section(), iso_allocate(), iso_assign_quantum_numbers(), iso_collapsed_Aul_update(), iso_level(), iso_prt_pops(), iso_put_recomb_error(), lines_helium(), lines_hydro(), PrtAllTau(), PrtHeader(), RT_tau_init(), and SanityCheckBegin().
◆ RadRec_caseB
| double t_iso_sp::RadRec_caseB |
case b recombination rate coefficient
Definition at line 513 of file iso.h.
Referenced by iso_radiative_recomb(), lines_hydro(), radius_first(), Reset(), RT_iso_integrate_RRC(), and SaveDo().
◆ RadRec_effec
| double t_iso_sp::RadRec_effec |
the total effective radiative recombination rate coefficient (cm3 s-1), radiative rate with correction for absorption and ionization
Definition at line 517 of file iso.h.
Referenced by iso_radiative_recomb(), and PrtHydroTrace1a().
◆ RadRecCool
| double t_iso_sp::RadRecCool |
◆ RecomCollisFrac
| double t_iso_sp::RecomCollisFrac |
ratio of collisional recombination rate to recom from all processes
Definition at line 520 of file iso.h.
Referenced by iso_ionize_recombine().
◆ RecomInducCool_Rate
| double t_iso_sp::RecomInducCool_Rate |
the actual induced recom cooling rate, erg cm-3 s-1
Definition at line 553 of file iso.h.
Referenced by iso_cool(), and lines().
◆ st
| qList t_iso_sp::st |
Definition at line 453 of file iso.h.
Referenced by atom_oi_calc(), AtomCSInterp(), t_fe2ovr_la::atoms_fe2ovr(), ChargTranSumHeat(), collision_strength_VF01(), ContSetIntensity(), ConvBase(), CoolEvaluate(), CS_l_mixing_S62(), DoFSMixing(), Fe2_cooling(), FeIILevelPops(), FeIILyaPump(), fill_array(), FillExtraLymanLine(), ForbiddenAuls(), H21_cm_pops(), HeatSum(), helike_quantum_defect(), hydro_vs_coll_str(), hydro_vs_deexcit(), InitCoreloadPostparse(), ion_CX(), ion_trim(), IonCSInterp(), IonHelium(), IonHydro(), iso_allocate(), iso_assign_quantum_numbers(), iso_charge_transfer_update(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), iso_collide(), iso_cool(), iso_create(), iso_level(), iso_photo(), iso_prt_pops(), iso_rad_rec_cooling_approx(), iso_radrecomb_from_cross_section(), iso_renorm(), iso_satellite(), iso_set_ion_rates(), iso_solve(), iso_zero(), IterRestart(), IterStart(), lines_general(), lines_helium(), lines_hydro(), OpacityAdd1Element(), OpacityAddTotal(), PresTotCurrent(), PrintRates(), radius_increment(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_OTS(), RT_stark(), RT_tau_inc(), RT_tau_init(), SanityCheckBegin(), save_opacity(), SaveDo(), and SaveSpecial().
◆ tr
| TransitionList* t_iso_sp::tr |
Definition at line 454 of file iso.h.
Referenced by iso_allocate(), RT_line_pumping(), and trans().
◆ TwoNu
| vector<two_photon> t_iso_sp::TwoNu |
Definition at line 586 of file iso.h.
Referenced by ContCreatePointers(), iso_level(), iso_update_rates(), IterStart(), lines_helium(), lines_hydro(), PrtComment(), Reset(), RT_diffuse(), RT_OTS_Update(), and SaveSpecial().
◆ xIonSimple
| double t_iso_sp::xIonSimple |
the ratio of ion to atom for all iso species xIonSimple is simple estimate, should agree at low density
Definition at line 465 of file iso.h.
Referenced by iso_ionize_recombine(), iso_level(), iso_set_ion_rates(), and PrtHydroTrace1a().
◆ xLineTotCool
| double t_iso_sp::xLineTotCool |
net cooling due to total collisional excit of lines
Definition at line 535 of file iso.h.
Referenced by iso_cool().
The documentation for this class was generated from the following file:
- /home/iurt/rpmbuild/BUILD/c13.05/source/iso.h
