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dynamics.h File Reference
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Data Structures

struct  t_dynamics
 

Functions

void DynaIterStart (void)
 
void DynaIterEnd (void)
 
void DynaStartZone (void)
 
void DynaEndZone (void)
 
void DynaIonize (void)
 
void DynaZero (void)
 
void DynaCreateArrays (void)
 
void ParseDynaWind (Parser &p)
 
void ParseDynaTime (Parser &p)
 
void DynaPrtZone (void)
 
void DynaSave (FILE *ipPnunit, char chJob)
 
void DynaPunchTimeDep (FILE *ipPnunit, const char *chJob)
 
realnum DynaFlux (double depth)
 

Variables

t_dynamics dynamics
 

Function Documentation

◆ DynaCreateArrays()

void DynaCreateArrays ( void  )

DynaCreateArrays allocate some space needed to save the dynamics structure variables, called from atmdat_readin

Definition at line 1400 of file dynamics.cpp.

References DEBUG_ENTRY, dense, dynamics, EnthalpyDensity, fixit(), ipH_LIKE, ipHYDROGEN, iso_sp, t_dense::lgElmtOn, LIMELM, MALLOC, mole_global, t_dynamics::molecules, NISO, t_mole_global::num_calc, t_iso_sp::numLevels_max, t_struc::nzlim, Old_DenMass, Old_density, Old_depth, Old_ednstr, Old_EnthalpyDensity, Old_gas_phase, Old_hiistr, Old_histr, Old_molecules, Old_pressure, Old_StatesElem, Old_xIonDense, Old_xLyman_depth, t_dynamics::oldFullDepth, t_dynamics::Rate, t_dynamics::Source, t_dynamics::StatesElem, struc, Upstream_molecules, UpstreamElem, UpstreamIon, and UpstreamStatesElem.

Referenced by atmdat_readin().

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◆ DynaEndZone()

void DynaEndZone ( void  )

DynaEndZone called at end of iteration when advection is turned on

Definition at line 853 of file dynamics.cpp.

References DEBUG_ENTRY, t_radius::depth, t_dynamics::DivergePresInteg, t_radius::drad, DynaFlux(), dynamics, ioQQQ, t_dynamics::lgTracePrint, radius, wind, and Wind::windv.

Referenced by ZoneEnd().

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◆ DynaFlux()

realnum DynaFlux ( double  depth)

Definition at line 1292 of file dynamics.cpp.

References DEBUG_ENTRY, dense, dynamics, t_dynamics::FluxCenter, t_dynamics::FluxIndex, t_dynamics::FluxScale, t_dynamics::lgFluxDScale, and t_dense::xMassDensity0.

Referenced by DynaEndZone(), PresTotCurrent(), and stepDensity().

◆ DynaIonize()

void DynaIonize ( void  )

DynaIonize, called from ionize to evaluate advective terms for current conditions

Definition at line 186 of file dynamics.cpp.

References AdvecSpecificEnthalpy, ASSERT, t_dynamics::Cool_r, DEBUG_ENTRY, dense, t_radius::depth, t_dynamics::dHeatdT, Dyn_dr, dynamics, EnthalpyDensity, t_phycon::EnthalpyDensity, t_dense::gas_phase, t_dynamics::Heat_v, t_thermal::htot, t_dense::IonHigh, t_dense::IonLow, ioQQQ, ipCARBON, ipH_LIKE, ipHYDROGEN, ipUpstream, iso_sp, iteration, t_dynamics::lgCoolHeat, t_dense::lgElmtOn, t_dynamics::lgTimeDependentStatic, t_dynamics::lgTracePrint, LIMELM, mole_global, t_dynamics::molecules, t_dynamics::n_initial_relax, NISO, t_mole_global::num_calc, t_iso_sp::numLevels_local, t_struc::nzlim, nzone, Old_depth, Old_xIonDense, t_dynamics::oldFullDepth, phycon, POW2, t_pressure::PresGasCurr, pressure, radius, t_dynamics::Rate, scalingDensity(), t_dynamics::Source, t_dynamics::StatesElem, struc, t_phycon::te, thermal, t_dynamics::timestep, Upstream_molecules, UpstreamElem, UpstreamIon, UpstreamStatesElem, wind, Wind::windv, t_dense::xIonDense, and t_dense::xMassDensity.

Referenced by ConvBase().

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◆ DynaIterEnd()

void DynaIterEnd ( void  )

routine called at end of iteration when advection is turned on

Definition at line 874 of file dynamics.cpp.

References t_dynamics::AdvecLengthInit, ASSERT, t_thermal::ConstTemp, t_dynamics::Cool(), cosmology, t_thermal::ctot, DEBUG_ENTRY, t_radius::depth, t_dynamics::discretization_error, t_dynamics::DivergePresInteg, t_radius::dr_max_last_iter, Dyn_dr, dynamics, DynaNewStep(), DynaSaveLast(), t_dynamics::error_scale2, GetHubbleFactor(), ioQQQ, iphUpstream, ipUpstream, ipyUpstream, t_iterations::iter_malloc, iteration, iterations, t_dynamics::lg_coronal_time_init, t_cosmology::lgDo, t_dynamics::lgRecom, t_radius::lgSdrmaxRel, Wind::lgStatic(), t_dynamics::lgStatic_completed, t_thermal::lgTemperatureConstant, lgtime_dt_specified, lgtime_Recom, t_dynamics::lgTimeDependentStatic, t_dynamics::lgTracePrint, t_dynamics::n_initial_relax, nTime_flux, phycon, t_pressure::PresGasCurr, pressure, radius, t_cosmology::redshift_current, t_cosmology::redshift_step, rfield, scalingDensity(), t_radius::sdrmax, StopCalc, t_radius::StopThickness, t_phycon::te, t_StopCalc::TempHiStopIteration, t_StopCalc::TempLoStopIteration, thermal, t_rfield::time_continuum_scale, time_dt, time_dt_scale_factor, t_dynamics::time_elapsed, time_elapsed_time, t_dynamics::timestep, t_dynamics::timestep_factor, timestep_next(), t_dynamics::timestep_stop, wind, and Wind::windv0.

Referenced by IterRestart().

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◆ DynaIterStart()

void DynaIterStart ( void  )

routine called at start of iteration when advection is turned on

Definition at line 2207 of file dynamics.cpp.

References cdEXIT, DEBUG_ENTRY, dynamics, EXIT_FAILURE, hextra, ioQQQ, iteration, t_dynamics::lgRecom, t_dynamics::lgStatic_completed, t_rfield::lgTimeVary, t_hextra::lgTurbHeatVaryTime, linint(), t_rfield::nShape, nTime_flux, rfield, t_rfield::time_continuum_scale, t_dynamics::time_elapsed, time_elapsed_time, time_flux_ratio, t_dynamics::timestep, t_hextra::TurbHeat, and t_hextra::TurbHeatSave.

Referenced by IterStart().

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◆ DynaPrtZone()

void DynaPrtZone ( void  )

DynaPrtZone - called to print zone results

Definition at line 2009 of file dynamics.cpp.

References AdvecSpecificEnthalpy, ASSERT, t_dynamics::Cool(), t_thermal::ctot, DEBUG_ENTRY, dense, dynamics, t_phycon::EnergyBinding, t_phycon::EnergyExcitation, t_phycon::EnergyIonization, EnthalpyDensity, t_dynamics::Heat(), ioQQQ, t_struc::nzlim, nzone, phycon, POW2, t_pressure::PresGasCurr, pressure, scalingDensity(), t_timesc::sound_speed_adiabatic, struc, thermal, timesc, wind, Wind::windv, and t_dense::xMassDensity.

Referenced by PrtZone().

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◆ DynaPunchTimeDep()

void DynaPunchTimeDep ( FILE *  ipPnunit,
const char *  chJob 
)

DynaPunchTimeDep - save info about time dependent solution

Parameters
ipPnunit
*chJob

Definition at line 2039 of file dynamics.cpp.

References cdIonFrac(), cdTemp(), colden, t_colden::colden, cosmology, DEBUG_ENTRY, dense, dynamics, t_dense::eden, findspecieslocal(), t_dense::gas_phase, ipCOL_HTOT, ipHYDROGEN, t_cosmology::redshift_current, rfield, scalingDensity(), SDIV(), t_rfield::time_continuum_scale, t_dynamics::time_elapsed, t_dynamics::timestep, and TotalInsanity().

Referenced by SaveDo().

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◆ DynaSave()

void DynaSave ( FILE *  ipPnunit,
char  chJob 
)

DynaSave save info related to advection

Parameters
ipPnunit
chJob

Definition at line 2148 of file dynamics.cpp.

References AdvecSpecificEnthalpy, t_dynamics::Cool(), t_dynamics::dCooldT(), DEBUG_ENTRY, t_radius::depth_mid_zone, dynamics, t_phycon::EnthalpyDensity, t_dynamics::Heat(), t_thermal::htot, ipHYDROGEN, phycon, radius, t_dynamics::Rate, scalingDensity(), t_dynamics::Source, thermal, and TotalInsanity().

Referenced by SaveDo().

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◆ DynaStartZone()

void DynaStartZone ( void  )

DynaStartZone called at start of iteration when advection is turned on

Definition at line 401 of file dynamics.cpp.

References AdvecSpecificEnthalpy, ASSERT, BIGFLOAT, DEBUG_ENTRY, dense, t_radius::depth, t_dynamics::discretization_error, t_dynamics::dRad, Dyn_dr, dynamics, t_dynamics::error_scale2, fp_bound(), ioQQQ, ipH_LIKE, iphUpstream, ipHYDROGEN, ipUpstream, ipyUpstream, isnan, iso_sp, iteration, t_dense::lgElmtOn, t_dynamics::lgTracePrint, LIMELM, t_mole_global::list, MAX2, MIN2, mole, mole_global, NISO, nOld_zone, t_mole_global::num_calc, t_iso_sp::numLevels_max, nzone, Old_density, Old_depth, Old_EnthalpyDensity, Old_molecules, Old_StatesElem, Old_xIonDense, POW2, radius, t_dynamics::Rate, scalingDensity(), SMALLFLOAT, t_dynamics::Source, t_mole_local::species, t_dynamics::Upstream_density, Upstream_molecules, UpstreamElem, UpstreamIon, and UpstreamStatesElem.

Referenced by ZoneStart().

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◆ DynaZero()

void DynaZero ( void  )

DynaZero zero some dynamics variables, called from zero.c

Definition at line 1321 of file dynamics.cpp.

References t_dynamics::AdvecLengthInit, AdvecSpecificEnthalpy, BIGFLOAT, t_dynamics::convergence_tolerance, t_dynamics::Cool_r, t_dynamics::CoolMax, DEBUG_ENTRY, t_dynamics::dHeatdT, t_dynamics::discretization_error, t_dynamics::DivergePresInteg, t_dynamics::dRad, dynamics, t_dynamics::error_scale2, t_dynamics::FluxCenter, t_dynamics::FluxIndex, t_dynamics::FluxScale, t_dynamics::Heat_v, t_dynamics::HeatMax, ipH_LIKE, t_dynamics::lgAdvection, t_dynamics::lgCoolHeat, t_dynamics::lgEquilibrium, t_dynamics::lgFluxDScale, t_dynamics::lgISO, t_dynamics::lgMETALS, t_dynamics::lgRecom, t_dynamics::lgSetPresMode, t_dynamics::lgStatic_completed, t_dynamics::lgTimeDependentStatic, t_dynamics::n_initial_relax, NISO, nOld_zone, t_dynamics::Rate, t_dynamics::time_elapsed, t_dynamics::timestep_factor, and t_dynamics::timestep_init.

Referenced by zero().

◆ ParseDynaTime()

void ParseDynaTime ( Parser &  p)

ParseDynaTime parse the time command, called from ParseCommands, in dynamics.c

Parameters
*chCard

Definition at line 1654 of file dynamics.cpp.

References advection_set_default(), ASSERT, cdEXIT, DEBUG_ENTRY, dynamics, EXIT_FAILURE, Parser::getline(), Parser::getNumberCheckAlwaysLog(), Parser::getNumberCheckAlwaysLogLim(), Parser::getNumberDefaultAlwaysLog(), ioQQQ, lgtime_dt_specified, lgtime_Recom, t_dynamics::lgTimeDependentStatic, t_dynamics::lgTracePrint, Parser::m_lgEOF, MALLOC, Parser::nMatch(), NTIME, nTime_flux, Wind::setStatic(), Parser::strcmp(), time_dt, time_dt_scale_factor, time_elapsed_time, time_flux_ratio, t_dynamics::timestep, t_dynamics::timestep_init, t_dynamics::timestep_stop, wind, Wind::windv, and Wind::windv0.

Referenced by ParseCommands().

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◆ ParseDynaWind()

void ParseDynaWind ( Parser &  p)
Todo:
2 Need to include divergence terms in pressure balance if flux index is != 0
Todo:
2 Need to include divergence terms in pressure balance if flux index is != 0

Definition at line 1798 of file dynamics.cpp.

References advection_set_default(), BIGDOUBLE, cdEXIT, t_dense::chDenseLaw, Wind::comass, DEBUG_ENTRY, dense, dynamics, EXIT_FAILURE, t_dynamics::FluxCenter, t_dynamics::FluxIndex, t_dynamics::FluxScale, Parser::getNumberCheck(), Parser::getNumberDefault(), Parser::getNumberPlain(), ioQQQ, t_pressure::lgContRadPresOn, Wind::lgDisk, t_dynamics::lgFluxDScale, t_dynamics::lgTracePrint, Wind::lgWindOK, Parser::nMatch(), pressure, Wind::setBallistic(), Wind::setDefault(), Wind::setStatic(), wind, Wind::windv, and Wind::windv0.

Referenced by ParseCommands().

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Variable Documentation

◆ dynamics

t_dynamics dynamics
extern

Definition at line 44 of file dynamics.cpp.

Referenced by AbundChange(), advection_set_default(), atom_levelN(), check_grid_file(), cloudy(), ConvBase(), ConvInitSolution(), ConvIterCheck(), CoolEvaluate(), CoolSave(), DynaCreateArrays(), DynaEndZone(), DynaFlux(), DynaIonize(), DynaIterEnd(), DynaIterStart(), DynaNewStep(), DynaPrtZone(), DynaPunchTimeDep(), DynaSave(), DynaSaveLast(), DynaStartZone(), DynaZero(), funjac(), HomogeneousSource(), InitDefaultsPreparse(), iso_level(), IterEnd(), IterRestart(), IterStart(), lgConserveEnergy(), lines_general(), mole_eval_dynamic_balance(), ParseCoronal(), ParseDont(), ParseDynaTime(), ParseDynaWind(), ParseSet(), pressureZone(), PresTotCurrent(), PrintRates(), PrtComment(), PrtFinal(), PrtZone(), radius_first(), radius_next(), SaveDo(), SaveHeat(), PresMode::set(), stepDensity(), timestep_next(), zero(), ZoneEnd(), and ZoneStart().

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