#include <dynamics.h>

Collaboration diagram for t_dynamics:

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Public Member Functions
double	Cool ()

double	Heat ()

double	dCooldT ()

Data Fields
bool	lgAdvection

double	Cool_r

double	Heat_v

double	dHeatdT

double	CoolMax

double	HeatMax

double	Rate

double **	Source

double ***	StatesElem

double *	molecules

bool	lgISO [NISO]

bool	lgMETALS

bool	lgCoolHeat

bool	lg_coronal_time_init

bool	lgTimeDependentStatic

double	time_elapsed

bool	lgRecom

bool	lgStatic_completed

double	AdvecLengthInit

double	FluxCenter

char	chPresMode [20]

double	ShockDepth

double	ShockMach

long int	n_initial_relax

double	FluxScale

bool	lgFluxDScale

double	FluxIndex

double	dRad

double	oldFullDepth

double	convergence_error

double	convergence_tolerance

double	discretization_error

double	error_scale1

double	error_scale2

bool	lgSetPresMode

realnum	Upstream_density

realnum	DivergePresInteg

bool	lgEquilibrium

bool	lgTracePrint

double	timestep_init

double	timestep

double	timestep_stop

double	timestep_factor

Detailed Description

all of these are initialized in zero

Definition at line 57 of file dynamics.h.

Member Function Documentation

◆ Cool()

double t_dynamics::Cool ( )

Definition at line 2187 of file dynamics.cpp.

References Cool_r, t_phycon::EnthalpyDensity, Heat_v, MERGE, phycon, and scalingDensity().

Referenced by CoolEvaluate(), CoolSave(), DynaIterEnd(), DynaPrtZone(), DynaSave(), lines_general(), SaveDo(), and SaveHeat().

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◆ dCooldT()

double t_dynamics::dCooldT ( )

Definition at line 2202 of file dynamics.cpp.

References Cool_r, phycon, t_pressure::PresGasCurr, pressure, and t_phycon::te.

Referenced by CoolEvaluate(), and DynaSave().

◆ Heat()

double t_dynamics::Heat ( )

Definition at line 2173 of file dynamics.cpp.

References Cool_r, t_phycon::EnthalpyDensity, Heat_v, MERGE, phycon, and scalingDensity().

Referenced by CoolEvaluate(), CoolSave(), DynaPrtZone(), DynaSave(), lines_general(), SaveDo(), and SaveHeat().

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Field Documentation

◆ AdvecLengthInit

double t_dynamics::AdvecLengthInit

the initial value of the advection length, reset with set advection length

Definition at line 108 of file dynamics.h.

Referenced by DynaIterEnd(), DynaZero(), and ParseSet().

◆ chPresMode

char t_dynamics::chPresMode[20]

flag set by the "set dynamics pressure mode" command

Definition at line 114 of file dynamics.h.

Referenced by ParseSet(), PresMode::set(), and stepDensity().

◆ convergence_error

double t_dynamics::convergence_error

convergence_error and discretization_error give estimates of convergence: :: convergence_error – change between the last iterations; :: discretization_error – error in the upstream interpolation. When (and if) discretization_error >> convergence_error, the interpolation length should be decreased.

They should both be based on the same norm of the models, but what norm may be experimented with – at present, it's H+/Htot just weighted by cell number, which makes the estimates sensitive to the structure of the primary ionization front.

Definition at line 153 of file dynamics.h.

Referenced by ConvIterCheck(), and DynaNewStep().

◆ convergence_tolerance

double t_dynamics::convergence_tolerance

the allowed rel error, by default 0.1

Definition at line 156 of file dynamics.h.

Referenced by ConvIterCheck(), DynaNewStep(), and DynaZero().

◆ Cool_r

double t_dynamics::Cool_r

advective cooling minus heating (erg cm^-3 s^-1)

Definition at line 63 of file dynamics.h.

Referenced by Cool(), dCooldT(), DynaIonize(), DynaZero(), and Heat().

◆ CoolMax

double t_dynamics::CoolMax

largest fraction of cooling and heating

Definition at line 68 of file dynamics.h.

Referenced by DynaZero(), IterStart(), lines_general(), and PrtComment().

◆ dHeatdT

double t_dynamics::dHeatdT

Definition at line 63 of file dynamics.h.

Referenced by CoolEvaluate(), DynaIonize(), and DynaZero().

◆ discretization_error

double t_dynamics::discretization_error

the error to be expected based on the coarseness of current advection length

Definition at line 159 of file dynamics.h.

Referenced by ConvIterCheck(), DynaIterEnd(), DynaNewStep(), DynaStartZone(), and DynaZero().

◆ DivergePresInteg

realnum t_dynamics::DivergePresInteg

Definition at line 171 of file dynamics.h.

Referenced by DynaEndZone(), DynaIterEnd(), DynaZero(), pressureZone(), and stepDensity().

◆ dRad

double t_dynamics::dRad

the proposed thickness for the next zone when advection is included

Definition at line 138 of file dynamics.h.

Referenced by DynaStartZone(), DynaZero(), and radius_next().

◆ error_scale1

double t_dynamics::error_scale1

two ways of scaling the error estimate for convergence

Definition at line 162 of file dynamics.h.

Referenced by DynaNewStep().

◆ error_scale2

double t_dynamics::error_scale2

Definition at line 162 of file dynamics.h.

Referenced by ConvIterCheck(), DynaIterEnd(), DynaNewStep(), DynaStartZone(), and DynaZero().

◆ FluxCenter

double t_dynamics::FluxCenter

the center of the particle flux law

Definition at line 111 of file dynamics.h.

Referenced by DynaFlux(), DynaZero(), and ParseDynaWind().

◆ FluxIndex

double t_dynamics::FluxIndex

the power law index of the particle flux law

Definition at line 135 of file dynamics.h.

Referenced by DynaFlux(), DynaZero(), and ParseDynaWind().

◆ FluxScale

double t_dynamics::FluxScale

the scale of the particle flux law

Definition at line 129 of file dynamics.h.

Referenced by DynaFlux(), DynaZero(), and ParseDynaWind().

◆ Heat_v

double t_dynamics::Heat_v

Definition at line 63 of file dynamics.h.

Referenced by Cool(), DynaIonize(), DynaZero(), and Heat().

◆ HeatMax

double t_dynamics::HeatMax

Definition at line 68 of file dynamics.h.

Referenced by DynaZero(), IterStart(), lines_general(), and PrtComment().

◆ lg_coronal_time_init

bool t_dynamics::lg_coronal_time_init

var set with coronal time init - says to use constant temperature on first relax iterations then let temp run free

Definition at line 93 of file dynamics.h.

Referenced by DynaIterEnd(), InitDefaultsPreparse(), and ParseCoronal().

◆ lgAdvection

bool t_dynamics::lgAdvection

is advection turned on ?, set to false in zero

Definition at line 60 of file dynamics.h.

Referenced by AbundChange(), advection_set_default(), atom_levelN(), ConvBase(), ConvIterCheck(), DynaZero(), funjac(), HomogeneousSource(), iso_level(), IterRestart(), IterStart(), mole_eval_dynamic_balance(), PrintRates(), PrtZone(), radius_next(), ZoneEnd(), and ZoneStart().

◆ lgCoolHeat

bool t_dynamics::lgCoolHeat

factor to turn off advective cooling

Definition at line 89 of file dynamics.h.

Referenced by DynaIonize(), DynaZero(), and ParseDont().

◆ lgEquilibrium

bool t_dynamics::lgEquilibrium

Enforce equilibrium populations

Definition at line 174 of file dynamics.h.

Referenced by DynaZero(), HomogeneousSource(), iso_level(), and ParseSet().

◆ lgFluxDScale

bool t_dynamics::lgFluxDScale

whether we also need to scale by the face density

Definition at line 132 of file dynamics.h.

Referenced by DynaFlux(), DynaZero(), and ParseDynaWind().

◆ lgISO

bool t_dynamics::lgISO[NISO]

factor to turn off advection for H-like or He-like iso seq, no advection h-like, he-like

Definition at line 83 of file dynamics.h.

Referenced by DynaZero(), iso_level(), ParseDont(), and PresTotCurrent().

◆ lgMETALS

bool t_dynamics::lgMETALS

factor to turn off advection for rest of ions, "no advection metals"

Definition at line 86 of file dynamics.h.

Referenced by DynaZero(), ParseDont(), and PresTotCurrent().

◆ lgRecom

bool t_dynamics::lgRecom

true if recombination logic in place

Definition at line 102 of file dynamics.h.

Referenced by DynaIterEnd(), DynaIterStart(), DynaZero(), PrtComment(), radius_next(), and timestep_next().

◆ lgSetPresMode

bool t_dynamics::lgSetPresMode

flag set true if set dynamics flow type was set - this means to use the specified option, and not to derive one

Definition at line 166 of file dynamics.h.

Referenced by DynaZero(), ParseSet(), and PresMode::set().

◆ lgStatic_completed

bool t_dynamics::lgStatic_completed

true if model ends since time dependent model is finished

Definition at line 105 of file dynamics.h.

Referenced by cloudy(), DynaIterEnd(), DynaIterStart(), DynaZero(), and SaveDo().

◆ lgTimeDependentStatic

bool t_dynamics::lgTimeDependentStatic

set true if time dependent static simulation

Definition at line 96 of file dynamics.h.

Referenced by check_grid_file(), ConvInitSolution(), CoolEvaluate(), DynaIonize(), DynaIterEnd(), DynaZero(), IterEnd(), lgConserveEnergy(), ParseDynaTime(), PresTotCurrent(), PrtComment(), radius_first(), radius_next(), and SaveDo().

◆ lgTracePrint

bool t_dynamics::lgTracePrint

Definition at line 177 of file dynamics.h.

Referenced by DynaEndZone(), DynaIonize(), DynaIterEnd(), DynaStartZone(), InitDefaultsPreparse(), ParseCoronal(), ParseDynaTime(), ParseDynaWind(), and stepDensity().

◆ molecules

double* t_dynamics::molecules

save molecular network densities

Definition at line 80 of file dynamics.h.

Referenced by DynaCreateArrays(), DynaIonize(), and mole_eval_dynamic_balance().

◆ n_initial_relax

long int t_dynamics::n_initial_relax

set how many iterations we will start with, before allowing changes. This allows the solution to relax to an equilibrium set with "set dynamics relax" command

Definition at line 126 of file dynamics.h.

Referenced by atom_levelN(), ConvInitSolution(), CoolEvaluate(), DynaIonize(), DynaIterEnd(), DynaZero(), funjac(), HomogeneousSource(), iso_level(), IterEnd(), mole_eval_dynamic_balance(), ParseSet(), PrtFinal(), and radius_next().

◆ oldFullDepth

double t_dynamics::oldFullDepth

the depth of the last iteration

Definition at line 141 of file dynamics.h.

Referenced by DynaCreateArrays(), DynaIonize(), and DynaSaveLast().

◆ Rate

double t_dynamics::Rate

the advection rate (s^-1)

Definition at line 71 of file dynamics.h.

Referenced by DynaCreateArrays(), DynaIonize(), DynaSave(), DynaStartZone(), DynaZero(), funjac(), HomogeneousSource(), iso_level(), mole_eval_dynamic_balance(), PrintRates(), and SaveDo().

◆ ShockDepth

double t_dynamics::ShockDepth

the shock depth in cm set with "set dynamics shock depth" command

Definition at line 117 of file dynamics.h.

Referenced by ParseSet(), and PresMode::set().

◆ ShockMach

double t_dynamics::ShockMach

the isothermal Mach number at which to insert an antishock set with "set dynamics antishock Mach" command

Definition at line 121 of file dynamics.h.

Referenced by ParseSet(), and PresMode::set().

◆ Source

double** t_dynamics::Source

the advective recombination rate (cm^-3 s^-1)

Definition at line 74 of file dynamics.h.

Referenced by DynaCreateArrays(), DynaIonize(), DynaSave(), DynaStartZone(), HomogeneousSource(), iso_level(), mole_eval_dynamic_balance(), PrintRates(), and SaveDo().

◆ StatesElem

double*** t_dynamics::StatesElem

the advective isolevel balance terms

Definition at line 77 of file dynamics.h.

Referenced by DynaCreateArrays(), DynaIonize(), and iso_level().

◆ time_elapsed

double t_dynamics::time_elapsed

elapsed time in time dependent static model

Definition at line 99 of file dynamics.h.

Referenced by ConvInitSolution(), DynaIterEnd(), DynaIterStart(), DynaPunchTimeDep(), DynaZero(), and SaveDo().

◆ timestep

double t_dynamics::timestep

Definition at line 182 of file dynamics.h.

Referenced by atom_levelN(), CoolEvaluate(), DynaIonize(), DynaIterEnd(), DynaIterStart(), DynaPunchTimeDep(), IterEnd(), ParseDynaTime(), and timestep_next().

◆ timestep_factor

double t_dynamics::timestep_factor

Definition at line 184 of file dynamics.h.

Referenced by DynaIterEnd(), and DynaZero().

◆ timestep_init

double t_dynamics::timestep_init

Definition at line 181 of file dynamics.h.

Referenced by DynaZero(), ParseDynaTime(), and timestep_next().

◆ timestep_stop

double t_dynamics::timestep_stop

Definition at line 183 of file dynamics.h.

Referenced by DynaIterEnd(), and ParseDynaTime().

◆ Upstream_density

realnum t_dynamics::Upstream_density

Upstream density

Definition at line 169 of file dynamics.h.

Referenced by CoolEvaluate(), DynaStartZone(), and zero().

The documentation for this struct was generated from the following files:

/home/iurt/rpmbuild/BUILD/c13.05/source/dynamics.h
/home/iurt/rpmbuild/BUILD/c13.05/source/dynamics.cpp

Public Member Functions

Data Fields

Detailed Description

Member Function Documentation

◆ Cool()

◆ dCooldT()

◆ Heat()

Field Documentation

◆ AdvecLengthInit

◆ chPresMode

◆ convergence_error

◆ convergence_tolerance

◆ Cool_r

◆ CoolMax

◆ dHeatdT

◆ discretization_error

◆ DivergePresInteg

◆ dRad

◆ error_scale1

◆ error_scale2

◆ FluxCenter

◆ FluxIndex

◆ FluxScale

◆ Heat_v

◆ HeatMax

◆ lg_coronal_time_init

◆ lgAdvection

◆ lgCoolHeat

◆ lgEquilibrium

◆ lgFluxDScale

◆ lgISO

◆ lgMETALS

◆ lgRecom

◆ lgSetPresMode

◆ lgStatic_completed

◆ lgTimeDependentStatic

◆ lgTracePrint

◆ molecules

◆ n_initial_relax

◆ oldFullDepth

◆ Rate

◆ ShockDepth

◆ ShockMach

◆ Source

◆ StatesElem

◆ time_elapsed

◆ timestep

◆ timestep_factor

◆ timestep_init

◆ timestep_stop

◆ Upstream_density